PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS730960.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 347aa    MW: 37862.8 Da    PI: 5.2532
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS730960.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.2e-10267315355
                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
           HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                    +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  EcS730960.10 267 NSHSLAERVRREKISERMRMLQELVPGC----NKITGKAVMLDEIINYVQSLQ 315
                   58**************************....999*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.15E-16262326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.34E-11262319No hitNo description
PROSITE profilePS5088815.567264314IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.5E-16265319IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.5E-7267315IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-10270320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MNSSGGSGGD DMGFPDGGNS AANCPSSGMI ANSISEEVPM MAMSSMSTLE RPPISVDPFF  60
TSGWDTLASL SHNENYGSSS LVSHGNFVGS SYPVLMDNQG FGRNGSTQLA QCLSDPRLQY  120
IGSGSISEMV GGSFGLPELN HLANHGSLPN RASNINSSGC ERNSEKGAQS CECQNSGEEP  180
DGSSAGDRRR KRSPDPSSQY CSNKNNEGDD SDVLRLQNEK KQKIEQPESA DFSKHNTKQS  240
KDDSSNDGEA PKENYIHMRA RRGQATNSHS LAERVRREKI SERMRMLQEL VPGCNKITGK  300
AVMLDEIINY VQSLQQQVEV CFIWNMFLVL QDDAVVFKKL PLRSWNN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010061617.10.0PREDICTED: transcription factor bHLH74-like
RefseqXP_010061618.10.0PREDICTED: transcription factor bHLH74-like
RefseqXP_010061619.10.0PREDICTED: transcription factor bHLH74-like
RefseqXP_010061620.10.0PREDICTED: transcription factor bHLH74-like
TrEMBLA0A059BSH80.0A0A059BSH8_EUCGR; Uncharacterized protein
STRINGVIT_18s0001g08600.t011e-93(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM51962849
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.14e-45bHLH family protein